WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M03F8.2c.1 Sequence Name  M03F8.2c.1
Length (nt)  1715   Chromosome Location  V: 5944736-5951415
Chromosome . Primary Identifier  V Chromosome Location . Start  5944736
Chromosome Location . End  5951415 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M03F8.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004206 pst-1 M03F8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M03F8.2c M03F8.2c 1227   V: 5944736-5944813

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M03F8.2c.1 5944736 5951415 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182355   78   V: 5944736-5944813 Caenorhabditis elegans
Exon182359   124   V: 5944903-5945026 Caenorhabditis elegans
Exon182363   358   V: 5945790-5946147 Caenorhabditis elegans
Exon182368   286   V: 5946196-5946481 Caenorhabditis elegans
Exon182374   105   V: 5947516-5947620 Caenorhabditis elegans
Exon182379   222   V: 5948112-5948333 Caenorhabditis elegans
Exon182388   542   V: 5950874-5951415 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M03F8.2c.1 5944736 5951415 1

1 Sequence

Length
1715

1 Sequence Ontology Term

Identifier Name Description
transcript