WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10F3.3.1 Sequence Name  C10F3.3.1
Length (nt)  3313   Chromosome Location  V: 5976024-5981478
Chromosome . Primary Identifier  V Chromosome Location . Start  5976024
Chromosome Location . End  5981478 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10F3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000069 acy-2 C10F3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10F3.3 C10F3.3 3243   V: 5976029-5976250

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10F3.3.1 5976024 5981478 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182462   227   V: 5976024-5976250 Caenorhabditis elegans
Exon182463   93   V: 5976579-5976671 Caenorhabditis elegans
Exon182464   166   V: 5976720-5976885 Caenorhabditis elegans
Exon182465   137   V: 5976930-5977066 Caenorhabditis elegans
Exon182466   323   V: 5977118-5977440 Caenorhabditis elegans
Exon182467   240   V: 5977490-5977729 Caenorhabditis elegans
Exon182468   225   V: 5977951-5978175 Caenorhabditis elegans
Exon182469   250   V: 5978231-5978480 Caenorhabditis elegans
Exon182470   89   V: 5978538-5978626 Caenorhabditis elegans
Exon182471   171   V: 5978675-5978845 Caenorhabditis elegans
Exon182472   154   V: 5978891-5979044 Caenorhabditis elegans
Exon182473   215   V: 5979093-5979307 Caenorhabditis elegans
Exon182474   70   V: 5979354-5979423 Caenorhabditis elegans
Exon182475   159   V: 5979484-5979642 Caenorhabditis elegans
Exon182476   249   V: 5979896-5980144 Caenorhabditis elegans
Exon182477   372   V: 5980222-5980593 Caenorhabditis elegans
Exon182478   173   V: 5981306-5981478 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10F3.3.1 5976024 5981478 1

1 Sequence

Length
3313

1 Sequence Ontology Term

Identifier Name Description
transcript