WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10F3.3.1 Sequence Name  C10F3.3.1
Length (nt)  3313   Chromosome Location  V: 5976024-5981478
Chromosome . Primary Identifier  V Chromosome Location . Start  5976024
Chromosome Location . End  5981478 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10F3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000069 acy-2 C10F3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10F3.3 C10F3.3 3243   V: 5976029-5976250

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10F3.3.1 5976024 5981478 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182483   227   V: 5976024-5976250 Caenorhabditis elegans
Exon182484   93   V: 5976579-5976671 Caenorhabditis elegans
Exon182485   166   V: 5976720-5976885 Caenorhabditis elegans
Exon182486   137   V: 5976930-5977066 Caenorhabditis elegans
Exon182487   323   V: 5977118-5977440 Caenorhabditis elegans
Exon182488   240   V: 5977490-5977729 Caenorhabditis elegans
Exon182489   225   V: 5977951-5978175 Caenorhabditis elegans
Exon182490   250   V: 5978231-5978480 Caenorhabditis elegans
Exon182491   89   V: 5978538-5978626 Caenorhabditis elegans
Exon182492   171   V: 5978675-5978845 Caenorhabditis elegans
Exon182493   154   V: 5978891-5979044 Caenorhabditis elegans
Exon182494   215   V: 5979093-5979307 Caenorhabditis elegans
Exon182495   70   V: 5979354-5979423 Caenorhabditis elegans
Exon182496   159   V: 5979484-5979642 Caenorhabditis elegans
Exon182497   249   V: 5979896-5980144 Caenorhabditis elegans
Exon182498   372   V: 5980222-5980593 Caenorhabditis elegans
Exon182499   173   V: 5981306-5981478 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10F3.3.1 5976024 5981478 1

1 Sequence

Length
3313

1 Sequence Ontology Term

Identifier Name Description
transcript