WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00198110 Gene Name  C10F3.12
Sequence Name  ? C10F3.12 Organism  Caenorhabditis elegans
Automated Description  Is affected by iron oxide nanoparticle based on microarray studies. Biotype  SO:0001263
Genetic Position  Length (nt)  ? 149
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00198110

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C10F3.12 C10F3.12 149   V: 5972043-5972191
 

Other

0 CDSs

0 RNAi Result

14 Allele

Public Name
gk963301
gk963591
gk963553
gk963042
tm11490
tm8331
gk963041
gk964259
gk964351
gk963850
gk964274
h15222
gk799396
gk603029

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00198110 5972043 5972191 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_5969176..5972042   2867 V: 5969176-5972042 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Most up-regulated genes after Cit-SPIONs exposure (p<0.01). Past 3.03 was used for all statistical analyses. Statistical significance between two groups was assessed by t tests. A gene is determined to be differentially expressed when p < 0.01 and only 75 genes were selected as differentially regulated for each expression cluster. WBPaper00051437:Cit-SPIONs_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00198110 5972043 5972191 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
149

1 Sequence Ontology Term