WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F29G9.4a Sequence Name  F29G9.4a
Length (nt)  996   Chromosome Location  V: 6011296-6011352
Chromosome . Primary Identifier  V Chromosome Location . Start  6011296
Chromosome Location . End  6011352
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29G9.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27375 FOS-1, isoform a 36.9 331 Caenorhabditis elegans
 

Other

43 RNAi

WormBase ID
WBRNAi00107709
WBRNAi00107708
WBRNAi00107796
WBRNAi00107797
WBRNAi00045945
WBRNAi00078880
WBRNAi00115880
WBRNAi00008727
WBRNAi00025320
WBRNAi00031590
WBRNAi00085548
WBRNAi00099794
WBRNAi00100404
WBRNAi00063265
WBRNAi00100778
WBRNAi00099188
WBRNAi00071534
WBRNAi00099592
WBRNAi00099390
WBRNAi00115829
WBRNAi00112405
WBRNAi00107547
WBRNAi00092156
WBRNAi00100030
WBRNAi00100217
WBRNAi00100591
WBRNAi00107483
WBRNAi00078883
WBRNAi00116172
WBRNAi00061041

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F29G9.4a 6011296 6011352 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001345 fos-1 F29G9.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F29G9.4a 6011296 6011352 1
CDS:F29G9.4a 6013510 6013623 1
CDS:F29G9.4a 6014219 6014719 1
CDS:F29G9.4a 6014773 6014974 1
CDS:F29G9.4a 6015570 6015691 1

1 Sequence

Length
996

1 Sequence Ontology Term

Identifier Name Description
CDS  

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F29G9.4a.1 F29G9.4a.1 1608   V: 6003601-6016083
Transcript:F29G9.4a.2 F29G9.4a.2 2298   V: 6008068-6016087
Transcript:F29G9.4a.3 F29G9.4a.3 3580   V: 6009063-6016087
Transcript:F29G9.4a.4 F29G9.4a.4 1722   V: 6010808-6016087
Transcript:F29G9.4a.5 F29G9.4a.5 1477   V: 6011211-6016087