WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R01B10.5b Sequence Name  R01B10.5b
Length (nt)  918   Chromosome Location  V: 6048635-6048680
Chromosome . Primary Identifier  V Chromosome Location . Start  6048635
Chromosome Location . End  6048680
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R01B10.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52972 JAMP-1, isoform b 34.2 305 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00051092
WBRNAi00017291

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R01B10.5b 6048635 6048680 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019807 jamp-1 R01B10.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:R01B10.5b 6048635 6048680 -1
CDS:R01B10.5b 6048883 6048973 -1
CDS:R01B10.5b 6049506 6049614 -1
CDS:R01B10.5b 6049666 6049825 -1
CDS:R01B10.5b 6050360 6050434 -1
CDS:R01B10.5b 6050484 6050627 -1
CDS:R01B10.5b 6050939 6051231 -1

1 Sequence

Length
918

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R01B10.5b.1 R01B10.5b.1 1659   V: 6047922-6051259