WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38A10A.1.1 Sequence Name  Y38A10A.1.1
Length (nt)  1020   Chromosome Location  V: 6055589-6056743
Chromosome . Primary Identifier  V Chromosome Location . Start  6055589
Chromosome Location . End  6056743 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38A10A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005098 srd-20 Y38A10A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38A10A.1 Y38A10A.1 1020   V: 6055589-6055773

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38A10A.1.1 6055589 6056743 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182650   185   V: 6055589-6055773 Caenorhabditis elegans
Exon182651   241   V: 6055817-6056057 Caenorhabditis elegans
Exon182652   343   V: 6056104-6056446 Caenorhabditis elegans
Exon182653   251   V: 6056493-6056743 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38A10A.1.1 6055589 6056743 1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
transcript