WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38A10A.1 Sequence Name  Y38A10A.1
Length (nt)  1020   Chromosome Location  V: 6055589-6055773
Chromosome . Primary Identifier  V Chromosome Location . Start  6055589
Chromosome Location . End  6055773
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38A10A.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21558 SRD-20 38.8 339 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00055968
WBRNAi00020244
WBRNAi00036821

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38A10A.1 6055589 6055773 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005098 srd-20 Y38A10A.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38A10A.1 6055589 6055773 1
CDS:Y38A10A.1 6055817 6056057 1
CDS:Y38A10A.1 6056104 6056446 1
CDS:Y38A10A.1 6056493 6056743 1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38A10A.1.1 Y38A10A.1.1 1020   V: 6055589-6056743