WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38A10A.5.1 Sequence Name  Y38A10A.5.1
Length (nt)  1401   Chromosome Location  V: 6098992-6100542
Chromosome . Primary Identifier  V Chromosome Location . Start  6098992
Chromosome Location . End  6100542 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38A10A.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000802 crt-1 Y38A10A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38A10A.5 Y38A10A.5 1188   V: 6099172-6099414

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38A10A.5.1 6098992 6100542 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182685   423   V: 6098992-6099414 Caenorhabditis elegans
Exon182686   624   V: 6099470-6100093 Caenorhabditis elegans
Exon182687   354   V: 6100189-6100542 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38A10A.5.1 6098992 6100542 -1

1 Sequence

Length
1401

1 Sequence Ontology Term

Identifier Name Description
transcript