WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17A9.3.1 Sequence Name  F17A9.3.1
Length (nt)  987   Chromosome Location  V: 6105607-6107530
Chromosome . Primary Identifier  V Chromosome Location . Start  6105607
Chromosome Location . End  6107530 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17A9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017535 atf-8 F17A9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17A9.3 F17A9.3 726   V: 6105736-6105897

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17A9.3.1 6105607 6107530 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182700   291   V: 6105607-6105897 Caenorhabditis elegans
Exon182701   66   V: 6106336-6106401 Caenorhabditis elegans
Exon182702   105   V: 6106458-6106562 Caenorhabditis elegans
Exon182703   222   V: 6106948-6107169 Caenorhabditis elegans
Exon182704   303   V: 6107228-6107530 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17A9.3.1 6105607 6107530 1

1 Sequence

Length
987

1 Sequence Ontology Term

Identifier Name Description
transcript