WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17A9.2.1 Sequence Name  F17A9.2.1
Length (nt)  1809   Chromosome Location  V: 6107828-6114856
Chromosome . Primary Identifier  V Chromosome Location . Start  6107828
Chromosome Location . End  6114856 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17A9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017534 cwf-19L1 F17A9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17A9.2 F17A9.2 1602   V: 6107828-6107920

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17A9.2.1 6107828 6114856 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182705   93   V: 6107828-6107920 Caenorhabditis elegans
Exon182706   115   V: 6107971-6108085 Caenorhabditis elegans
Exon182707   444   V: 6108134-6108577 Caenorhabditis elegans
Exon182708   154   V: 6108624-6108777 Caenorhabditis elegans
Exon182709   119   V: 6108852-6108970 Caenorhabditis elegans
Exon182718   251   V: 6113870-6114120 Caenorhabditis elegans
Exon182719   165   V: 6114176-6114340 Caenorhabditis elegans
Exon182720   468   V: 6114389-6114856 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17A9.2.1 6107828 6114856 1

1 Sequence

Length
1809

1 Sequence Ontology Term

Identifier Name Description
transcript