WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8a.1 Sequence Name  W06H8.8a.1
Length (nt)  45876   Chromosome Location  V: 6120909-6202626
Chromosome . Primary Identifier  V Chromosome Location . Start  6120909
Chromosome Location . End  6202626 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8a W06H8.8a 45483   V: 6121593-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8a.1 6120909 6202626 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

59 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182729   6   V: 6120909-6120914 Caenorhabditis elegans
Exon182733   338   V: 6121299-6121636 Caenorhabditis elegans
Exon182749   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182762   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182775   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182788   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182801   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182814   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182827   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182840   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182853   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182866   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182879   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182892   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182905   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182918   172   V: 6129229-6129400 Caenorhabditis elegans
Exon182931   45   V: 6129492-6129536 Caenorhabditis elegans
Exon182938   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon182951   135   V: 6130915-6131049 Caenorhabditis elegans
Exon182968   123   V: 6133050-6133172 Caenorhabditis elegans
Exon182981   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183079   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183092   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183105   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183118   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183131   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183144   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183157   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183182   45   V: 6161647-6161691 Caenorhabditis elegans
Exon183191   502   V: 6164440-6164941 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8a.1 6120909 6202626 -1

1 Sequence

Length
45876

1 Sequence Ontology Term

Identifier Name Description
transcript