WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8a.2 Sequence Name  W06H8.8a.2
Length (nt)  45903   Chromosome Location  V: 6121266-6202626
Chromosome . Primary Identifier  V Chromosome Location . Start  6121266
Chromosome Location . End  6202626 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8a W06H8.8a 45483   V: 6121593-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8a.2 6121266 6202626 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

58 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182730   371   V: 6121266-6121636 Caenorhabditis elegans
Exon182750   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182763   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182776   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182789   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182802   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182815   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182828   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182841   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182854   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182867   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182880   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182893   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182906   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182919   172   V: 6129229-6129400 Caenorhabditis elegans
Exon182932   45   V: 6129492-6129536 Caenorhabditis elegans
Exon182939   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon182952   135   V: 6130915-6131049 Caenorhabditis elegans
Exon182969   123   V: 6133050-6133172 Caenorhabditis elegans
Exon182982   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183080   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183093   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183106   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183119   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183132   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183145   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183158   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183183   45   V: 6161647-6161691 Caenorhabditis elegans
Exon183192   502   V: 6164440-6164941 Caenorhabditis elegans
Exon183201   353   V: 6165182-6165534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8a.2 6121266 6202626 -1

1 Sequence

Length
45903

1 Sequence Ontology Term

Identifier Name Description
transcript