WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8d.1 Sequence Name  W06H8.8d.1
Length (nt)  45757   Chromosome Location  V: 6121274-6202533
Chromosome . Primary Identifier  V Chromosome Location . Start  6121274
Chromosome Location . End  6202533 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8d W06H8.8d 45438   V: 6121593-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06H8.8d.1 6121274 6202533 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

57 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182732   363   V: 6121274-6121636 Caenorhabditis elegans
Exon182752   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182765   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182778   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182791   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182804   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182817   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182830   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182843   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182856   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182869   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182882   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182895   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182908   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182921   172   V: 6129229-6129400 Caenorhabditis elegans
Exon182941   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon182954   135   V: 6130915-6131049 Caenorhabditis elegans
Exon182971   123   V: 6133050-6133172 Caenorhabditis elegans
Exon182984   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183082   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183095   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183108   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183121   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183134   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183147   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183160   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183185   45   V: 6161647-6161691 Caenorhabditis elegans
Exon183194   502   V: 6164440-6164941 Caenorhabditis elegans
Exon183203   353   V: 6165182-6165534 Caenorhabditis elegans
Exon183212   4232   V: 6165579-6169810 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06H8.8d.1 6121274 6202533 -1

1 Sequence

Length
45757

1 Sequence Ontology Term

Identifier Name Description
transcript