WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8k.1 Sequence Name  W06H8.8k.1
Length (nt)  23577   Chromosome Location  V: 6121577-6160654
Chromosome . Primary Identifier  V Chromosome Location . Start  6121577
Chromosome Location . End  6160654 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8k W06H8.8k 23577   V: 6121577-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06H8.8k.1 6121577 6160654 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182734   60   V: 6121577-6121636 Caenorhabditis elegans
Exon182747   68   V: 6121683-6121750 Caenorhabditis elegans
Exon182758   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182771   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182784   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182797   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182810   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182823   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182836   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182849   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182862   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182875   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182888   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182901   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182914   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182927   172   V: 6129229-6129400 Caenorhabditis elegans
Exon182936   45   V: 6129492-6129536 Caenorhabditis elegans
Exon182947   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon182960   135   V: 6130915-6131049 Caenorhabditis elegans
Exon182977   123   V: 6133050-6133172 Caenorhabditis elegans
Exon182990   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183088   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183101   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183114   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183127   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183140   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183153   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183166   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183170   151   V: 6154949-6155099 Caenorhabditis elegans
Exon183174   849   V: 6155145-6155993 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06H8.8k.1 6121577 6160654 -1

1 Sequence

Length
23577

1 Sequence Ontology Term

Identifier Name Description
transcript