WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8a.2 Sequence Name  W06H8.8a.2
Length (nt)  45903   Chromosome Location  V: 6121266-6202626
Chromosome . Primary Identifier  V Chromosome Location . Start  6121266
Chromosome Location . End  6202626 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8a W06H8.8a 45483   V: 6121593-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8a.2 6121266 6202626 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

58 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182785   371   V: 6121266-6121636 Caenorhabditis elegans
Exon182805   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182818   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182831   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182844   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182857   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182870   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182883   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182896   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182909   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182922   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182935   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182948   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182961   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182974   172   V: 6129229-6129400 Caenorhabditis elegans
Exon182987   45   V: 6129492-6129536 Caenorhabditis elegans
Exon182994   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon183007   135   V: 6130915-6131049 Caenorhabditis elegans
Exon183024   123   V: 6133050-6133172 Caenorhabditis elegans
Exon183037   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183135   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183148   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183161   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183174   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183187   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183200   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183213   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183238   45   V: 6161647-6161691 Caenorhabditis elegans
Exon183247   502   V: 6164440-6164941 Caenorhabditis elegans
Exon183256   353   V: 6165182-6165534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8a.2 6121266 6202626 -1

1 Sequence

Length
45903

1 Sequence Ontology Term

Identifier Name Description
transcript