WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8f.1 Sequence Name  W06H8.8f.1
Length (nt)  45874   Chromosome Location  V: 6121270-6202533
Chromosome . Primary Identifier  V Chromosome Location . Start  6121270
Chromosome Location . End  6202533 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8f W06H8.8f 45567   V: 6121577-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8f.1 6121270 6202533 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

59 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182786   367   V: 6121270-6121636 Caenorhabditis elegans
Exon182798   68   V: 6121683-6121750 Caenorhabditis elegans
Exon182809   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182822   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182835   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182848   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182861   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182874   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182887   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182900   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182913   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182926   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182939   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182952   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182965   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182978   172   V: 6129229-6129400 Caenorhabditis elegans
Exon182989   45   V: 6129492-6129536 Caenorhabditis elegans
Exon182998   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon183011   135   V: 6130915-6131049 Caenorhabditis elegans
Exon183028   123   V: 6133050-6133172 Caenorhabditis elegans
Exon183041   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183139   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183152   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183165   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183178   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183191   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183204   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183217   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183242   45   V: 6161647-6161691 Caenorhabditis elegans
Exon183251   502   V: 6164440-6164941 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8f.1 6121270 6202533 -1

1 Sequence

Length
45874

1 Sequence Ontology Term

Identifier Name Description
transcript