WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8d.1 Sequence Name  W06H8.8d.1
Length (nt)  45757   Chromosome Location  V: 6121274-6202533
Chromosome . Primary Identifier  V Chromosome Location . Start  6121274
Chromosome Location . End  6202533 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8d W06H8.8d 45438   V: 6121593-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8d.1 6121274 6202533 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

57 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182787   363   V: 6121274-6121636 Caenorhabditis elegans
Exon182807   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182820   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182833   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182846   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182859   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182872   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182885   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182898   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182911   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182924   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182937   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182950   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182963   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182976   172   V: 6129229-6129400 Caenorhabditis elegans
Exon182996   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon183009   135   V: 6130915-6131049 Caenorhabditis elegans
Exon183026   123   V: 6133050-6133172 Caenorhabditis elegans
Exon183039   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183137   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183150   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183163   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183176   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183189   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183202   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183215   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183240   45   V: 6161647-6161691 Caenorhabditis elegans
Exon183249   502   V: 6164440-6164941 Caenorhabditis elegans
Exon183258   353   V: 6165182-6165534 Caenorhabditis elegans
Exon183267   4232   V: 6165579-6169810 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8d.1 6121274 6202533 -1

1 Sequence

Length
45757

1 Sequence Ontology Term

Identifier Name Description
transcript