WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8i.1 Sequence Name  W06H8.8i.1
Length (nt)  44244   Chromosome Location  V: 6121577-6202533
Chromosome . Primary Identifier  V Chromosome Location . Start  6121577
Chromosome Location . End  6202533 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8i W06H8.8i 44244   V: 6121577-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8i.1 6121577 6202533 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

57 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182738   60   V: 6121577-6121636 Caenorhabditis elegans
Exon182746   68   V: 6121683-6121750 Caenorhabditis elegans
Exon182757   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182770   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182783   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182796   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182809   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182822   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182835   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182848   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182861   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182874   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182887   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182900   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182913   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182926   172   V: 6129229-6129400 Caenorhabditis elegans
Exon182946   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon182959   135   V: 6130915-6131049 Caenorhabditis elegans
Exon182976   123   V: 6133050-6133172 Caenorhabditis elegans
Exon182989   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183087   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183100   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183113   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183126   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183139   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183152   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183165   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183190   45   V: 6161647-6161691 Caenorhabditis elegans
Exon183199   502   V: 6164440-6164941 Caenorhabditis elegans
Exon183208   353   V: 6165182-6165534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8i.1 6121577 6202533 -1

1 Sequence

Length
44244

1 Sequence Ontology Term

Identifier Name Description
transcript