WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8h.1 Sequence Name  W06H8.8h.1
Length (nt)  45522   Chromosome Location  V: 6121577-6202533
Chromosome . Primary Identifier  V Chromosome Location . Start  6121577
Chromosome Location . End  6202533 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8h W06H8.8h 45522   V: 6121577-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8h.1 6121577 6202533 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

58 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182792   60   V: 6121577-6121636 Caenorhabditis elegans
Exon182800   68   V: 6121683-6121750 Caenorhabditis elegans
Exon182811   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182824   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182837   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182850   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182863   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182876   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182889   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182902   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182915   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182928   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182941   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182954   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182967   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182980   172   V: 6129229-6129400 Caenorhabditis elegans
Exon183000   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon183013   135   V: 6130915-6131049 Caenorhabditis elegans
Exon183030   123   V: 6133050-6133172 Caenorhabditis elegans
Exon183043   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183141   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183154   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183167   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183180   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183193   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183206   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183219   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183244   45   V: 6161647-6161691 Caenorhabditis elegans
Exon183253   502   V: 6164440-6164941 Caenorhabditis elegans
Exon183262   353   V: 6165182-6165534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8h.1 6121577 6202533 -1

1 Sequence

Length
45522

1 Sequence Ontology Term

Identifier Name Description
transcript