WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8i.1 Sequence Name  W06H8.8i.1
Length (nt)  44244   Chromosome Location  V: 6121577-6202533
Chromosome . Primary Identifier  V Chromosome Location . Start  6121577
Chromosome Location . End  6202533 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8i W06H8.8i 44244   V: 6121577-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8i.1 6121577 6202533 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

57 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182793   60   V: 6121577-6121636 Caenorhabditis elegans
Exon182801   68   V: 6121683-6121750 Caenorhabditis elegans
Exon182812   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182825   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182838   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182851   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182864   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182877   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182890   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182903   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182916   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182929   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182942   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182955   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182968   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182981   172   V: 6129229-6129400 Caenorhabditis elegans
Exon183001   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon183014   135   V: 6130915-6131049 Caenorhabditis elegans
Exon183031   123   V: 6133050-6133172 Caenorhabditis elegans
Exon183044   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183142   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183155   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183168   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183181   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183194   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183207   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183220   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183245   45   V: 6161647-6161691 Caenorhabditis elegans
Exon183254   502   V: 6164440-6164941 Caenorhabditis elegans
Exon183263   353   V: 6165182-6165534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8i.1 6121577 6202533 -1

1 Sequence

Length
44244

1 Sequence Ontology Term

Identifier Name Description
transcript