WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8e.1 Sequence Name  W06H8.8e.1
Length (nt)  44160   Chromosome Location  V: 6121593-6202533
Chromosome . Primary Identifier  V Chromosome Location . Start  6121593
Chromosome Location . End  6202533 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8e W06H8.8e 44160   V: 6121593-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8e.1 6121593 6202533 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

56 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182741   44   V: 6121593-6121636 Caenorhabditis elegans
Exon182753   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182766   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182779   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182792   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182805   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182818   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182831   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182844   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182857   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182870   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182883   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182896   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182909   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182922   172   V: 6129229-6129400 Caenorhabditis elegans
Exon182942   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon182955   135   V: 6130915-6131049 Caenorhabditis elegans
Exon182972   123   V: 6133050-6133172 Caenorhabditis elegans
Exon182985   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183083   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183096   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183109   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183122   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183135   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183148   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183161   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183186   45   V: 6161647-6161691 Caenorhabditis elegans
Exon183195   502   V: 6164440-6164941 Caenorhabditis elegans
Exon183204   353   V: 6165182-6165534 Caenorhabditis elegans
Exon183213   4232   V: 6165579-6169810 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8e.1 6121593 6202533 -1

1 Sequence

Length
44160

1 Sequence Ontology Term

Identifier Name Description
transcript