WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8b.1 Sequence Name  W06H8.8b.1
Length (nt)  44298   Chromosome Location  V: 6121593-6202626
Chromosome . Primary Identifier  V Chromosome Location . Start  6121593
Chromosome Location . End  6202626 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8b W06H8.8b 44205   V: 6121593-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8b.1 6121593 6202626 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

57 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182742   44   V: 6121593-6121636 Caenorhabditis elegans
Exon182751   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182764   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182777   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182790   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182803   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182816   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182829   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182842   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182855   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182868   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182881   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182894   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182907   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182920   172   V: 6129229-6129400 Caenorhabditis elegans
Exon182933   45   V: 6129492-6129536 Caenorhabditis elegans
Exon182940   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon182953   135   V: 6130915-6131049 Caenorhabditis elegans
Exon182970   123   V: 6133050-6133172 Caenorhabditis elegans
Exon182983   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183081   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183094   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183107   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183120   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183133   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183146   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183159   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183184   45   V: 6161647-6161691 Caenorhabditis elegans
Exon183193   502   V: 6164440-6164941 Caenorhabditis elegans
Exon183202   353   V: 6165182-6165534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8b.1 6121593 6202626 -1

1 Sequence

Length
44298

1 Sequence Ontology Term

Identifier Name Description
transcript