WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8m.1 Sequence Name  W06H8.8m.1
Length (nt)  23493   Chromosome Location  V: 6121593-6160654
Chromosome . Primary Identifier  V Chromosome Location . Start  6121593
Chromosome Location . End  6160654 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8m W06H8.8m 23493   V: 6121593-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8m.1 6121593 6160654 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182794   44   V: 6121593-6121636 Caenorhabditis elegans
Exon182815   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182828   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182841   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182854   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182867   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182880   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182893   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182906   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182919   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182932   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182945   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182958   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182971   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182984   172   V: 6129229-6129400 Caenorhabditis elegans
Exon182992   45   V: 6129492-6129536 Caenorhabditis elegans
Exon183004   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon183017   135   V: 6130915-6131049 Caenorhabditis elegans
Exon183034   123   V: 6133050-6133172 Caenorhabditis elegans
Exon183047   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183145   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183158   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183171   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183184   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183197   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183210   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183223   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183227   151   V: 6154949-6155099 Caenorhabditis elegans
Exon183231   849   V: 6155145-6155993 Caenorhabditis elegans
Exon183235   4500   V: 6156155-6160654 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8m.1 6121593 6160654 -1

1 Sequence

Length
23493

1 Sequence Ontology Term

Identifier Name Description
transcript