WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8e.1 Sequence Name  W06H8.8e.1
Length (nt)  44160   Chromosome Location  V: 6121593-6202533
Chromosome . Primary Identifier  V Chromosome Location . Start  6121593
Chromosome Location . End  6202533 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8e W06H8.8e 44160   V: 6121593-6121636

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8e.1 6121593 6202533 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

56 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182796   44   V: 6121593-6121636 Caenorhabditis elegans
Exon182808   147   V: 6121812-6121958 Caenorhabditis elegans
Exon182821   80   V: 6122005-6122084 Caenorhabditis elegans
Exon182834   66   V: 6122133-6122198 Caenorhabditis elegans
Exon182847   140   V: 6122247-6122386 Caenorhabditis elegans
Exon182860   173   V: 6122431-6122603 Caenorhabditis elegans
Exon182873   109   V: 6122651-6122759 Caenorhabditis elegans
Exon182886   163   V: 6122810-6122972 Caenorhabditis elegans
Exon182899   62   V: 6123038-6123099 Caenorhabditis elegans
Exon182912   118   V: 6123145-6123262 Caenorhabditis elegans
Exon182925   107   V: 6123307-6123413 Caenorhabditis elegans
Exon182938   111   V: 6123465-6123575 Caenorhabditis elegans
Exon182951   84   V: 6123642-6123725 Caenorhabditis elegans
Exon182964   5414   V: 6123771-6129184 Caenorhabditis elegans
Exon182977   172   V: 6129229-6129400 Caenorhabditis elegans
Exon182997   1083   V: 6129584-6130666 Caenorhabditis elegans
Exon183010   135   V: 6130915-6131049 Caenorhabditis elegans
Exon183027   123   V: 6133050-6133172 Caenorhabditis elegans
Exon183040   71   V: 6134453-6134523 Caenorhabditis elegans
Exon183138   159   V: 6144022-6144180 Caenorhabditis elegans
Exon183151   216   V: 6144360-6144575 Caenorhabditis elegans
Exon183164   4345   V: 6144977-6149321 Caenorhabditis elegans
Exon183177   234   V: 6149443-6149676 Caenorhabditis elegans
Exon183190   3798   V: 6149891-6153688 Caenorhabditis elegans
Exon183203   114   V: 6153899-6154012 Caenorhabditis elegans
Exon183216   680   V: 6154121-6154800 Caenorhabditis elegans
Exon183241   45   V: 6161647-6161691 Caenorhabditis elegans
Exon183250   502   V: 6164440-6164941 Caenorhabditis elegans
Exon183259   353   V: 6165182-6165534 Caenorhabditis elegans
Exon183268   4232   V: 6165579-6169810 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W06H8.8e.1 6121593 6202533 -1

1 Sequence

Length
44160

1 Sequence Ontology Term

Identifier Name Description
transcript