WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8c.1 Sequence Name  W06H8.8c.1
Length (nt)  9968   Chromosome Location  V: 6190505-6202632
Chromosome . Primary Identifier  V Chromosome Location . Start  6190505
Chromosome Location . End  6202632 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8c W06H8.8c 9648   V: 6190726-6191105

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06H8.8c.1 6190505 6202632 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon183353   601   V: 6190505-6191105 Caenorhabditis elegans
Exon183355   3960   V: 6191688-6195647 Caenorhabditis elegans
Exon183361   140   V: 6196227-6196366 Caenorhabditis elegans
Exon183372   974   V: 6196429-6197402 Caenorhabditis elegans
Exon183383   512   V: 6197463-6197974 Caenorhabditis elegans
Exon183394   146   V: 6198021-6198166 Caenorhabditis elegans
Exon183405   170   V: 6198323-6198492 Caenorhabditis elegans
Exon183416   962   V: 6198551-6199512 Caenorhabditis elegans
Exon183426   1278   V: 6199641-6200918 Caenorhabditis elegans
Exon183433   240   V: 6201052-6201291 Caenorhabditis elegans
Exon183444   351   V: 6201486-6201836 Caenorhabditis elegans
Exon183455   139   V: 6201888-6202026 Caenorhabditis elegans
Exon183466   272   V: 6202074-6202345 Caenorhabditis elegans
Exon183484   223   V: 6202410-6202632 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06H8.8c.1 6190505 6202632 -1

1 Sequence

Length
9968

1 Sequence Ontology Term

Identifier Name Description
transcript