WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06H8.8j.1 Sequence Name  W06H8.8j.1
Length (nt)  8602   Chromosome Location  V: 6190581-6202620
Chromosome . Primary Identifier  V Chromosome Location . Start  6190581
Chromosome Location . End  6202620 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.8j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006436 ttn-1 W06H8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8j W06H8.8j 8370   V: 6190726-6191105

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06H8.8j.1 6190581 6202620 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon183409   525   V: 6190581-6191105 Caenorhabditis elegans
Exon183411   3960   V: 6191688-6195647 Caenorhabditis elegans
Exon183423   140   V: 6196227-6196366 Caenorhabditis elegans
Exon183434   974   V: 6196429-6197402 Caenorhabditis elegans
Exon183445   512   V: 6197463-6197974 Caenorhabditis elegans
Exon183456   146   V: 6198021-6198166 Caenorhabditis elegans
Exon183467   170   V: 6198323-6198492 Caenorhabditis elegans
Exon183478   962   V: 6198551-6199512 Caenorhabditis elegans
Exon183495   240   V: 6201052-6201291 Caenorhabditis elegans
Exon183506   351   V: 6201486-6201836 Caenorhabditis elegans
Exon183517   139   V: 6201888-6202026 Caenorhabditis elegans
Exon183528   272   V: 6202074-6202345 Caenorhabditis elegans
Exon183535   211   V: 6202410-6202620 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06H8.8j.1 6190581 6202620 -1

1 Sequence

Length
8602

1 Sequence Ontology Term

Identifier Name Description
transcript