WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08B12.5b.1 Sequence Name  K08B12.5b.1
Length (nt)  5507   Chromosome Location  V: 6257392-6267287
Chromosome . Primary Identifier  V Chromosome Location . Start  6257392
Chromosome Location . End  6267287 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08B12.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006437 mrck-1 K08B12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08B12.5b K08B12.5b 4773   V: 6258030-6258062

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08B12.5b.1 6257392 6267287 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon183625   671   V: 6257392-6258062 Caenorhabditis elegans
Exon183633   148   V: 6258777-6258924 Caenorhabditis elegans
Exon183639   198   V: 6258981-6259178 Caenorhabditis elegans
Exon183648   292   V: 6260778-6261069 Caenorhabditis elegans
Exon183654   157   V: 6261753-6261909 Caenorhabditis elegans
Exon183661   2063   V: 6261960-6264022 Caenorhabditis elegans
Exon183664   709   V: 6264258-6264966 Caenorhabditis elegans
Exon183673   340   V: 6265037-6265376 Caenorhabditis elegans
Exon183677   365   V: 6265848-6266212 Caenorhabditis elegans
Exon183681   272   V: 6266282-6266553 Caenorhabditis elegans
Exon183684   81   V: 6266945-6267025 Caenorhabditis elegans
Exon183687   211   V: 6267077-6267287 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08B12.5b.1 6257392 6267287 -1

1 Sequence

Length
5507

1 Sequence Ontology Term

Identifier Name Description
transcript