WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08B12.5a.1 Sequence Name  K08B12.5a.1
Length (nt)  4830   Chromosome Location  V: 6257979-6267191
Chromosome . Primary Identifier  V Chromosome Location . Start  6257979
Chromosome Location . End  6267191 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08B12.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006437 mrck-1 K08B12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08B12.5a K08B12.5a 4779   V: 6258030-6258062

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08B12.5a.1 6257979 6267191 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon183627   84   V: 6257979-6258062 Caenorhabditis elegans
Exon183631   148   V: 6258777-6258924 Caenorhabditis elegans
Exon183637   198   V: 6258981-6259178 Caenorhabditis elegans
Exon183646   292   V: 6260778-6261069 Caenorhabditis elegans
Exon183652   157   V: 6261753-6261909 Caenorhabditis elegans
Exon183659   2063   V: 6261960-6264022 Caenorhabditis elegans
Exon183666   715   V: 6264258-6264972 Caenorhabditis elegans
Exon183671   340   V: 6265037-6265376 Caenorhabditis elegans
Exon183675   365   V: 6265848-6266212 Caenorhabditis elegans
Exon183679   272   V: 6266282-6266553 Caenorhabditis elegans
Exon183682   81   V: 6266945-6267025 Caenorhabditis elegans
Exon183685   115   V: 6267077-6267191 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08B12.5a.1 6257979 6267191 -1

1 Sequence

Length
4830

1 Sequence Ontology Term

Identifier Name Description
transcript