WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31F7.2a.1 Sequence Name  F31F7.2a.1
Length (nt)  2217   Chromosome Location  V: 6270852-6274911
Chromosome . Primary Identifier  V Chromosome Location . Start  6270852
Chromosome Location . End  6274911 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31F7.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017965 F31F7.2 F31F7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31F7.2a F31F7.2a 2070   V: 6270935-6271279

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F31F7.2a.1 6270852 6274911 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon183693   428   V: 6270852-6271279 Caenorhabditis elegans
Exon183694   264   V: 6271330-6271593 Caenorhabditis elegans
Exon183695   187   V: 6272037-6272223 Caenorhabditis elegans
Exon183697   117   V: 6273127-6273243 Caenorhabditis elegans
Exon183699   273   V: 6273315-6273587 Caenorhabditis elegans
Exon183701   320   V: 6273630-6273949 Caenorhabditis elegans
Exon183703   291   V: 6273996-6274286 Caenorhabditis elegans
Exon183706   337   V: 6274575-6274911 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F31F7.2a.1 6270852 6274911 1

1 Sequence

Length
2217

1 Sequence Ontology Term

Identifier Name Description
transcript