WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12B6.2a.1 Sequence Name  K12B6.2a.1
Length (nt)  2439   Chromosome Location  V: 6281359-6284892
Chromosome . Primary Identifier  V Chromosome Location . Start  6281359
Chromosome Location . End  6284892 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12B6.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019667 spe-49 K12B6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12B6.2a K12B6.2a 2187   V: 6281422-6281504

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K12B6.2a.1 6281359 6284892 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon183721   146   V: 6281359-6281504 Caenorhabditis elegans
Exon183723   184   V: 6281547-6281730 Caenorhabditis elegans
Exon183725   58   V: 6281775-6281832 Caenorhabditis elegans
Exon183727   180   V: 6281884-6282063 Caenorhabditis elegans
Exon183729   296   V: 6282113-6282408 Caenorhabditis elegans
Exon183731   96   V: 6282455-6282550 Caenorhabditis elegans
Exon183733   78   V: 6282750-6282827 Caenorhabditis elegans
Exon183735   234   V: 6282873-6283106 Caenorhabditis elegans
Exon183737   134   V: 6283150-6283283 Caenorhabditis elegans
Exon183739   105   V: 6283332-6283436 Caenorhabditis elegans
Exon183741   121   V: 6283484-6283604 Caenorhabditis elegans
Exon183743   135   V: 6283652-6283786 Caenorhabditis elegans
Exon183745   102   V: 6283829-6283930 Caenorhabditis elegans
Exon183747   102   V: 6284117-6284218 Caenorhabditis elegans
Exon183749   92   V: 6284263-6284354 Caenorhabditis elegans
Exon183751   185   V: 6284402-6284586 Caenorhabditis elegans
Exon183753   191   V: 6284702-6284892 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K12B6.2a.1 6281359 6284892 1

1 Sequence

Length
2439

1 Sequence Ontology Term

Identifier Name Description
transcript