WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12B6.2b.1 Sequence Name  K12B6.2b.1
Length (nt)  2432   Chromosome Location  V: 6281416-6284895
Chromosome . Primary Identifier  V Chromosome Location . Start  6281416
Chromosome Location . End  6284895 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12B6.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019667 spe-49 K12B6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12B6.2b K12B6.2b 2319   V: 6281422-6281504

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K12B6.2b.1 6281416 6284895 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon183777   89   V: 6281416-6281504 Caenorhabditis elegans
Exon183779   184   V: 6281547-6281730 Caenorhabditis elegans
Exon183781   58   V: 6281775-6281832 Caenorhabditis elegans
Exon183783   180   V: 6281884-6282063 Caenorhabditis elegans
Exon183785   296   V: 6282113-6282408 Caenorhabditis elegans
Exon183787   96   V: 6282455-6282550 Caenorhabditis elegans
Exon183789   78   V: 6282750-6282827 Caenorhabditis elegans
Exon183791   234   V: 6282873-6283106 Caenorhabditis elegans
Exon183793   134   V: 6283150-6283283 Caenorhabditis elegans
Exon183795   105   V: 6283332-6283436 Caenorhabditis elegans
Exon183797   121   V: 6283484-6283604 Caenorhabditis elegans
Exon183799   135   V: 6283652-6283786 Caenorhabditis elegans
Exon183801   102   V: 6283829-6283930 Caenorhabditis elegans
Exon183803   102   V: 6284117-6284218 Caenorhabditis elegans
Exon183805   92   V: 6284263-6284354 Caenorhabditis elegans
Exon183807   232   V: 6284402-6284633 Caenorhabditis elegans
Exon183809   194   V: 6284702-6284895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K12B6.2b.1 6281416 6284895 1

1 Sequence

Length
2432

1 Sequence Ontology Term

Identifier Name Description
transcript