WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K12B6.5 Sequence Name  K12B6.5
Length (nt)  1086   Chromosome Location  V: 6284920-6285076
Chromosome . Primary Identifier  V Chromosome Location . Start  6284920
Chromosome Location . End  6285076
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12B6.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE12172 SRN-1 40.6 361 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00050643
WBRNAi00017045

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K12B6.5 6284920 6285076 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005640 srn-1 K12B6.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:K12B6.5 6284920 6285076 -1
CDS:K12B6.5 6285120 6285271 -1
CDS:K12B6.5 6285321 6285590 -1
CDS:K12B6.5 6285778 6285862 -1
CDS:K12B6.5 6285918 6286036 -1
CDS:K12B6.5 6286083 6286208 -1
CDS:K12B6.5 6286258 6286434 -1

1 Sequence

Length
1086

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K12B6.5.1 K12B6.5.1 1182   V: 6284833-6286443