WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28C12.4a.2 Sequence Name  T28C12.4a.2
Length (nt)  2210   Chromosome Location  V: 6323226-6326392
Chromosome . Primary Identifier  V Chromosome Location . Start  6323226
Chromosome Location . End  6326392 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28C12.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020891 cest-24 T28C12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28C12.4a T28C12.4a 1977   V: 6323282-6323489

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28C12.4a.2 6323226 6326392 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon183806   29   V: 6323226-6323254 Caenorhabditis elegans
Exon183807   213   V: 6323277-6323489 Caenorhabditis elegans
Exon183810   80   V: 6323616-6323695 Caenorhabditis elegans
Exon183813   123   V: 6323778-6323900 Caenorhabditis elegans
Exon183819   165   V: 6324138-6324302 Caenorhabditis elegans
Exon183823   521   V: 6324404-6324924 Caenorhabditis elegans
Exon183827   170   V: 6325076-6325245 Caenorhabditis elegans
Exon183831   173   V: 6325318-6325490 Caenorhabditis elegans
Exon183835   278   V: 6325539-6325816 Caenorhabditis elegans
Exon183840   458   V: 6325935-6326392 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28C12.4a.2 6323226 6326392 1

1 Sequence

Length
2210

1 Sequence Ontology Term

Identifier Name Description
transcript