WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13H6.1a.1 Sequence Name  F13H6.1a.1
Length (nt)  3485   Chromosome Location  V: 6357458-6362997
Chromosome . Primary Identifier  V Chromosome Location . Start  6357458
Chromosome Location . End  6362997 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13H6.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017430 bcl-11 F13H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13H6.1a F13H6.1a 2073   V: 6357609-6357623

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13H6.1a.1 6357458 6362997 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon183894   166   V: 6357458-6357623 Caenorhabditis elegans
Exon183895   106   V: 6357675-6357780 Caenorhabditis elegans
Exon183897   45   V: 6357828-6357872 Caenorhabditis elegans
Exon183900   215   V: 6358391-6358605 Caenorhabditis elegans
Exon183902   102   V: 6358736-6358837 Caenorhabditis elegans
Exon183904   82   V: 6359145-6359226 Caenorhabditis elegans
Exon183910   724   V: 6360078-6360801 Caenorhabditis elegans
Exon183912   476   V: 6360853-6361328 Caenorhabditis elegans
Exon183914   272   V: 6361379-6361650 Caenorhabditis elegans
Exon183916   1297   V: 6361701-6362997 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13H6.1a.1 6357458 6362997 1

1 Sequence

Length
3485

1 Sequence Ontology Term

Identifier Name Description
transcript