WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57F4.1.1 Sequence Name  F57F4.1.1
Length (nt)  1519   Chromosome Location  V: 6390463-6392566
Chromosome . Primary Identifier  V Chromosome Location . Start  6390463
Chromosome Location . End  6392566 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57F4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019015 F57F4.1 F57F4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57F4.1 F57F4.1 1386   V: 6390501-6390569

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57F4.1.1 6390463 6392566 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon183948   107   V: 6390463-6390569 Caenorhabditis elegans
Exon183949   240   V: 6390616-6390855 Caenorhabditis elegans
Exon183950   212   V: 6390899-6391110 Caenorhabditis elegans
Exon183951   145   V: 6391472-6391616 Caenorhabditis elegans
Exon183952   222   V: 6391668-6391889 Caenorhabditis elegans
Exon183953   345   V: 6391932-6392276 Caenorhabditis elegans
Exon183954   248   V: 6392319-6392566 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57F4.1.1 6390463 6392566 1

1 Sequence

Length
1519

1 Sequence Ontology Term

Identifier Name Description
transcript