WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05H4.2.1 Sequence Name  T05H4.2.1
Length (nt)  1307   Chromosome Location  V: 6448656-6450217
Chromosome . Primary Identifier  V Chromosome Location . Start  6448656
Chromosome Location . End  6450217 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05H4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020265 fbxa-196 T05H4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05H4.2 T05H4.2 1218   V: 6448708-6448778

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05H4.2.1 6448656 6450217 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184114   123   V: 6448656-6448778 Caenorhabditis elegans
Exon184115   207   V: 6448900-6449106 Caenorhabditis elegans
Exon184116   87   V: 6449152-6449238 Caenorhabditis elegans
Exon184117   643   V: 6449284-6449926 Caenorhabditis elegans
Exon184118   247   V: 6449971-6450217 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05H4.2.1 6448656 6450217 1

1 Sequence

Length
1307

1 Sequence Ontology Term

Identifier Name Description
transcript