WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01A11.3a.1 Sequence Name  W01A11.3a.1
Length (nt)  3806   Chromosome Location  V: 6465065-6487880
Chromosome . Primary Identifier  V Chromosome Location . Start  6465065
Chromosome Location . End  6487880 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01A11.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006815 unc-83 W01A11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01A11.3a W01A11.3a 3126   V: 6465213-6465284

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01A11.3a.1 6465065 6487880 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184191   220   V: 6465065-6465284 Caenorhabditis elegans
Exon184195   99   V: 6467005-6467103 Caenorhabditis elegans
Exon184201   93   V: 6471882-6471974 Caenorhabditis elegans
Exon184204   97   V: 6472608-6472704 Caenorhabditis elegans
Exon184207   137   V: 6472859-6472995 Caenorhabditis elegans
Exon184214   65   V: 6477144-6477208 Caenorhabditis elegans
Exon184217   136   V: 6477260-6477395 Caenorhabditis elegans
Exon184223   215   V: 6480771-6480985 Caenorhabditis elegans
Exon184227   150   V: 6481456-6481605 Caenorhabditis elegans
Exon184232   209   V: 6482763-6482971 Caenorhabditis elegans
Exon184237   155   V: 6483017-6483171 Caenorhabditis elegans
Exon184242   83   V: 6483439-6483521 Caenorhabditis elegans
Exon184247   400   V: 6483827-6484226 Caenorhabditis elegans
Exon184253   524   V: 6485652-6486175 Caenorhabditis elegans
Exon184258   405   V: 6486319-6486723 Caenorhabditis elegans
Exon184263   818   V: 6487063-6487880 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01A11.3a.1 6465065 6487880 1

1 Sequence

Length
3806

1 Sequence Ontology Term

Identifier Name Description
transcript