WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01A11.3b.1 Sequence Name  W01A11.3b.1
Length (nt)  3487   Chromosome Location  V: 6471882-6487880
Chromosome . Primary Identifier  V Chromosome Location . Start  6471882
Chromosome Location . End  6487880 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01A11.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006815 unc-83 W01A11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01A11.3b W01A11.3b 2928   V: 6471909-6471974

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01A11.3b.1 6471882 6487880 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184203   93   V: 6471882-6471974 Caenorhabditis elegans
Exon184205   97   V: 6472608-6472704 Caenorhabditis elegans
Exon184208   137   V: 6472859-6472995 Caenorhabditis elegans
Exon184215   65   V: 6477144-6477208 Caenorhabditis elegans
Exon184218   136   V: 6477260-6477395 Caenorhabditis elegans
Exon184224   215   V: 6480771-6480985 Caenorhabditis elegans
Exon184228   150   V: 6481456-6481605 Caenorhabditis elegans
Exon184233   209   V: 6482763-6482971 Caenorhabditis elegans
Exon184238   155   V: 6483017-6483171 Caenorhabditis elegans
Exon184243   83   V: 6483439-6483521 Caenorhabditis elegans
Exon184248   400   V: 6483827-6484226 Caenorhabditis elegans
Exon184254   524   V: 6485652-6486175 Caenorhabditis elegans
Exon184259   405   V: 6486319-6486723 Caenorhabditis elegans
Exon184264   818   V: 6487063-6487880 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01A11.3b.1 6471882 6487880 1

1 Sequence

Length
3487

1 Sequence Ontology Term

Identifier Name Description
transcript