WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01A11.2.1 Sequence Name  W01A11.2.1
Length (nt)  1175   Chromosome Location  V: 6497108-6498484
Chromosome . Primary Identifier  V Chromosome Location . Start  6497108
Chromosome Location . End  6498484 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01A11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020910 dgtr-1 W01A11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01A11.2 W01A11.2 1080   V: 6497110-6497286

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01A11.2.1 6497108 6498484 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184225   179   V: 6497108-6497286 Caenorhabditis elegans
Exon184226   108   V: 6497336-6497443 Caenorhabditis elegans
Exon184227   437   V: 6497490-6497926 Caenorhabditis elegans
Exon184228   219   V: 6497981-6498199 Caenorhabditis elegans
Exon184229   232   V: 6498253-6498484 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01A11.2.1 6497108 6498484 1

1 Sequence

Length
1175

1 Sequence Ontology Term

Identifier Name Description
transcript