WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01A11.1a.1 Sequence Name  W01A11.1a.1
Length (nt)  1422   Chromosome Location  V: 6499224-6502428
Chromosome . Primary Identifier  V Chromosome Location . Start  6499224
Chromosome Location . End  6502428 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01A11.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020909 W01A11.1 W01A11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01A11.1a W01A11.1a 1359   V: 6499224-6499307

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01A11.1a.1 6499224 6502428 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184251   84   V: 6499224-6499307 Caenorhabditis elegans
Exon184252   102   V: 6499353-6499454 Caenorhabditis elegans
Exon184253   96   V: 6500944-6501039 Caenorhabditis elegans
Exon184254   446   V: 6501092-6501537 Caenorhabditis elegans
Exon184256   94   V: 6501586-6501679 Caenorhabditis elegans
Exon184258   112   V: 6501724-6501835 Caenorhabditis elegans
Exon184260   232   V: 6501886-6502117 Caenorhabditis elegans
Exon184263   256   V: 6502173-6502428 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01A11.1a.1 6499224 6502428 1

1 Sequence

Length
1422

1 Sequence Ontology Term

Identifier Name Description
transcript