WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40G12A.1.1 Sequence Name  Y40G12A.1.1
Length (nt)  825   Chromosome Location  V: 6506752-6508803
Chromosome . Primary Identifier  V Chromosome Location . Start  6506752
Chromosome Location . End  6508803 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40G12A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006723 ubh-3 Y40G12A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40G12A.1 Y40G12A.1 684   V: 6506893-6507032

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y40G12A.1.1 6506752 6508803 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184257   281   V: 6506752-6507032 Caenorhabditis elegans
Exon184258   120   V: 6507088-6507207 Caenorhabditis elegans
Exon184259   361   V: 6508331-6508691 Caenorhabditis elegans
Exon184260   63   V: 6508741-6508803 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y40G12A.1.1 6506752 6508803 -1

1 Sequence

Length
825

1 Sequence Ontology Term

Identifier Name Description
transcript