WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04A8.6a.1 Sequence Name  K04A8.6a.1
Length (nt)  3315   Chromosome Location  V: 6533614-6538062
Chromosome . Primary Identifier  V Chromosome Location . Start  6533614
Chromosome Location . End  6538062 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04A8.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001089 dre-1 K04A8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04A8.6a K04A8.6a 2811   V: 6533990-6534116

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04A8.6a.1 6533614 6538062 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184350   503   V: 6533614-6534116 Caenorhabditis elegans
Exon184353   99   V: 6534312-6534410 Caenorhabditis elegans
Exon184356   148   V: 6534463-6534610 Caenorhabditis elegans
Exon184359   306   V: 6534714-6535019 Caenorhabditis elegans
Exon184362   181   V: 6535160-6535340 Caenorhabditis elegans
Exon184365   532   V: 6535394-6535925 Caenorhabditis elegans
Exon184368   191   V: 6535979-6536169 Caenorhabditis elegans
Exon184371   853   V: 6536286-6537138 Caenorhabditis elegans
Exon184374   144   V: 6537466-6537609 Caenorhabditis elegans
Exon184377   358   V: 6537705-6538062 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04A8.6a.1 6533614 6538062 -1

1 Sequence

Length
3315

1 Sequence Ontology Term

Identifier Name Description
transcript