WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04A8.9.1 Sequence Name  K04A8.9.1
Length (nt)  693   Chromosome Location  V: 6560173-6561692
Chromosome . Primary Identifier  V Chromosome Location . Start  6560173
Chromosome Location . End  6561692 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04A8.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005004 spp-19 K04A8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04A8.9 K04A8.9 438   V: 6560228-6560329

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04A8.9.1 6560173 6561692 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184406   157   V: 6560173-6560329 Caenorhabditis elegans
Exon184407   81   V: 6560377-6560457 Caenorhabditis elegans
Exon184408   143   V: 6560514-6560656 Caenorhabditis elegans
Exon184409   312   V: 6561381-6561692 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04A8.9.1 6560173 6561692 -1

1 Sequence

Length
693

1 Sequence Ontology Term

Identifier Name Description
transcript