WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1055.4.1 Sequence Name  ZK1055.4.1
Length (nt)  3587   Chromosome Location  V: 6582062-6587446
Chromosome . Primary Identifier  V Chromosome Location . Start  6582062
Chromosome Location . End  6587446 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1055.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022845 ZK1055.4 ZK1055.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1055.4 ZK1055.4 1158   V: 6585632-6585721

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1055.4.1 6582062 6587446 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184534   85   V: 6582062-6582146 Caenorhabditis elegans
Exon184535   151   V: 6582401-6582551 Caenorhabditis elegans
Exon184537   87   V: 6582597-6582683 Caenorhabditis elegans
Exon184539   117   V: 6582733-6582849 Caenorhabditis elegans
Exon184541   119   V: 6582893-6583011 Caenorhabditis elegans
Exon184543   102   V: 6583319-6583420 Caenorhabditis elegans
Exon184545   94   V: 6583469-6583562 Caenorhabditis elegans
Exon184547   233   V: 6583608-6583840 Caenorhabditis elegans
Exon184551   1456   V: 6584266-6585721 Caenorhabditis elegans
Exon184553   69   V: 6585773-6585841 Caenorhabditis elegans
Exon184555   130   V: 6585952-6586081 Caenorhabditis elegans
Exon184557   83   V: 6586138-6586220 Caenorhabditis elegans
Exon184559   288   V: 6586270-6586557 Caenorhabditis elegans
Exon184562   573   V: 6586874-6587446 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1055.4.1 6582062 6587446 1

1 Sequence

Length
3587

1 Sequence Ontology Term

Identifier Name Description
transcript