WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F44C4.5 Sequence Name  F44C4.5
Length (nt)  897   Chromosome Location  V: 6624777-6624974
Chromosome . Primary Identifier  V Chromosome Location . Start  6624777
Chromosome Location . End  6624974
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44C4.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47017 PPT-1 34.0 298 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00047260
WBRNAi00014912
WBRNAi00032222
WBRNAi00103734
WBRNAi00103743
WBRNAi00103712
WBRNAi00103724

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F44C4.5 6624777 6624974 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004092 ppt-1 F44C4.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F44C4.5 6624777 6624974 -1
CDS:F44C4.5 6625187 6625285 -1
CDS:F44C4.5 6625549 6625639 -1
CDS:F44C4.5 6625689 6625859 -1
CDS:F44C4.5 6625919 6626156 -1
CDS:F44C4.5 6626206 6626305 -1

1 Sequence

Length
897

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F44C4.5.1 F44C4.5.1 1012   V: 6624701-6626344