WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10H9.2.1 Sequence Name  T10H9.2.1
Length (nt)  4555   Chromosome Location  V: 6633225-6639665
Chromosome . Primary Identifier  V Chromosome Location . Start  6633225
Chromosome Location . End  6639665 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10H9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004740 scd-2 T10H9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10H9.2 T10H9.2 4266   V: 6633269-6633436

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10H9.2.1 6633225 6639665 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184600   212   V: 6633225-6633436 Caenorhabditis elegans
Exon184601   58   V: 6633482-6633539 Caenorhabditis elegans
Exon184602   180   V: 6633938-6634117 Caenorhabditis elegans
Exon184603   105   V: 6634172-6634276 Caenorhabditis elegans
Exon184604   92   V: 6634323-6634414 Caenorhabditis elegans
Exon184605   128   V: 6634459-6634586 Caenorhabditis elegans
Exon184606   146   V: 6634633-6634778 Caenorhabditis elegans
Exon184607   138   V: 6634916-6635053 Caenorhabditis elegans
Exon184608   335   V: 6635096-6635430 Caenorhabditis elegans
Exon184609   134   V: 6635486-6635619 Caenorhabditis elegans
Exon184610   146   V: 6635665-6635810 Caenorhabditis elegans
Exon184611   251   V: 6635853-6636103 Caenorhabditis elegans
Exon184612   571   V: 6636386-6636956 Caenorhabditis elegans
Exon184613   120   V: 6637005-6637124 Caenorhabditis elegans
Exon184614   117   V: 6637213-6637329 Caenorhabditis elegans
Exon184615   149   V: 6637379-6637527 Caenorhabditis elegans
Exon184616   242   V: 6637581-6637822 Caenorhabditis elegans
Exon184617   127   V: 6637873-6637999 Caenorhabditis elegans
Exon184618   203   V: 6638050-6638252 Caenorhabditis elegans
Exon184619   521   V: 6638372-6638892 Caenorhabditis elegans
Exon184620   251   V: 6639033-6639283 Caenorhabditis elegans
Exon184621   329   V: 6639337-6639665 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10H9.2.1 6633225 6639665 1

1 Sequence

Length
4555

1 Sequence Ontology Term

Identifier Name Description
transcript