WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10H9.2.1 Sequence Name  T10H9.2.1
Length (nt)  4555   Chromosome Location  V: 6633225-6639665
Chromosome . Primary Identifier  V Chromosome Location . Start  6633225
Chromosome Location . End  6639665 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10H9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004740 scd-2 T10H9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10H9.2 T10H9.2 4266   V: 6633269-6633436

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10H9.2.1 6633225 6639665 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184621   212   V: 6633225-6633436 Caenorhabditis elegans
Exon184622   58   V: 6633482-6633539 Caenorhabditis elegans
Exon184623   180   V: 6633938-6634117 Caenorhabditis elegans
Exon184624   105   V: 6634172-6634276 Caenorhabditis elegans
Exon184625   92   V: 6634323-6634414 Caenorhabditis elegans
Exon184626   128   V: 6634459-6634586 Caenorhabditis elegans
Exon184627   146   V: 6634633-6634778 Caenorhabditis elegans
Exon184628   138   V: 6634916-6635053 Caenorhabditis elegans
Exon184629   335   V: 6635096-6635430 Caenorhabditis elegans
Exon184630   134   V: 6635486-6635619 Caenorhabditis elegans
Exon184631   146   V: 6635665-6635810 Caenorhabditis elegans
Exon184632   251   V: 6635853-6636103 Caenorhabditis elegans
Exon184633   571   V: 6636386-6636956 Caenorhabditis elegans
Exon184634   120   V: 6637005-6637124 Caenorhabditis elegans
Exon184635   117   V: 6637213-6637329 Caenorhabditis elegans
Exon184636   149   V: 6637379-6637527 Caenorhabditis elegans
Exon184637   242   V: 6637581-6637822 Caenorhabditis elegans
Exon184638   127   V: 6637873-6637999 Caenorhabditis elegans
Exon184639   203   V: 6638050-6638252 Caenorhabditis elegans
Exon184640   521   V: 6638372-6638892 Caenorhabditis elegans
Exon184641   251   V: 6639033-6639283 Caenorhabditis elegans
Exon184642   329   V: 6639337-6639665 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10H9.2.1 6633225 6639665 1

1 Sequence

Length
4555

1 Sequence Ontology Term

Identifier Name Description
transcript