WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T25F10.6a Sequence Name  T25F10.6a
Length (nt)  1221   Chromosome Location  V: 6765986-6766051
Chromosome . Primary Identifier  V Chromosome Location . Start  6765986
Chromosome Location . End  6766051
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25F10.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07537 CLIK-1, isoform a 44.4 406 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00054148
WBRNAi00019227
WBRNAi00035969
WBRNAi00093042
WBRNAi00064315
WBRNAi00103544
WBRNAi00094905

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T25F10.6a 6765986 6766051 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020808 clik-1 T25F10.6 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T25F10.6a 6765986 6766051 -1
CDS:T25F10.6a 6766104 6766455 -1
CDS:T25F10.6a 6766732 6766855 -1
CDS:T25F10.6a 6766909 6767082 -1
CDS:T25F10.6a 6767131 6767402 -1
CDS:T25F10.6a 6767457 6767605 -1
CDS:T25F10.6a 6768369 6768452 -1

1 Sequence

Length
1221

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T25F10.6a.1 T25F10.6a.1 1719   V: 6765768-6768732