WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC404.8.1 Sequence Name  ZC404.8.1
Length (nt)  1523   Chromosome Location  V: 6783187-6784903
Chromosome . Primary Identifier  V Chromosome Location . Start  6783187
Chromosome Location . End  6784903 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC404.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004984 spn-4 ZC404.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC404.8 ZC404.8 1056   V: 6783653-6783774

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC404.8.1 6783187 6784903 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon184962   588   V: 6783187-6783774 Caenorhabditis elegans
Exon184963   716   V: 6783828-6784543 Caenorhabditis elegans
Exon184964   63   V: 6784592-6784654 Caenorhabditis elegans
Exon184965   105   V: 6784701-6784805 Caenorhabditis elegans
Exon184966   51   V: 6784853-6784903 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC404.8.1 6783187 6784903 -1

1 Sequence

Length
1523

1 Sequence Ontology Term

Identifier Name Description
transcript